If you publish work processed using Hydra, please cite:

Wait, E., Winter, M. & Cohen, A. R. Hydra image processor: 5-D GPU image analysis library with MATLAB and python wrappers. Bioinformatics (2019). doi:10.1093/bioinformatics/btz523

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Documentation

  • My recommendations on hardware configuration.

  • Get Windows to allow computation on GPU by following these steps.

  • Learn how to compile the image processing library.

  • Extend HIP with your unique filter or operation by following these instructions.

  • Understand how HIP does memory management and job scheduling here.

  • See why treating edges of images is important and how HIP does it differently.